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by semiinfinitely 22 days ago
bioinformaticians have been making these useless bioinformatic-toolkit-in-my-favorite-programming-language repos for years
3 comments

Well, what else are we going to do while waiting for the bench scientists to finish collecting data?
Dissertationware is common in a lot of fields, honestly.
Hate to agree, but it is true. For a while, I think, the main sequencing framework was in perl (Bioperl). Not sure what was best for structures - possibly Biojava?

It is very tempting, though - 'just' make a nice, clean API in your favourite language (eg Haskell, Ruby, ...) and everyone will flock to use it! Maybe.

Why don't you mention Biopython? Bioperl is already too old and not much up-to-date with newest data.
He’s talking about the past (“For a while, …”). Up to early 2010s, I would say.