[kerzol]

+1 to github-style journal.

Also there is "The Self Journal of Science" that aims to fix peer-review and exterminate bad publishing habits --- http://sjscience.org/

And my marginal, but an open source project --- http://papers-gamma.link

[kerzol]

Also you have PKP, that even organises a conf about this stuff http://pkp.sfu.ca/pkp2015