I think, when he is the author, than he can decide which licence to use. There are many examples (like MySQL) where double licensing is used. The original author can decide, which licence he finds appropriate.
The author of micropolisJS is not the author of 3D City. In this case, 3D City needs to be licensed under the GPL, and I believe 3D City needs to include the copyright details for the original port.
In addition, micropolisJS has additional terms added to the GPL [0], which are clearly linked to from the top of every source file in micropolisJS [1], which need to be distributed with 3D City.
They're all derived from the original source code of SimCity from Maxis, that I ported to Unix for DUX Software starting in 1991 (see http://art.net/~hopkins/Don/hyperlook/SimCity.README and http://art.net/~hopkins/Don/simcity/simcity-announcement.htm... ), and which was donated by EA to the OLPC project under a modified version of the GPL V3 license, with the condition that the name "SimCity" only be used for versions of the game that have been reviewed and approved by EA QA:
2.1 Modification. EA hereby grants to OLPC a non-exclusive, non-transferable, non-sub licensable, non-assignable, revocable right and license to modify the Original SimCity as provided by EA for the sole purpose of producing a version of the Original SimCity for distribution on laptops provided through the OLPC Program pursuant to the specifications set forth in Exhibit A ("OLPC SimCity"). All right, title and interest in OLPC SimCity and any interim modifications shall belong solely to EA. OLPC SimCity, and any subsequent versions, will not be distributed by OLPC unless the software meets the requirements set forth in Exhibit A. For the avoidance of doubt, nothing contained in this Agreement shall be deemed to limit or restrict EA’s right to use, modify, sell, distribute or license the Original SimCity in any other manner as EA so desires.
EXHIBIT A

Territory: Worldwide
Original SimCity Code: Title: SimCity (published in or about 1990)
Format: Unix Platform
Deliverable Items: EA will deliver to OLPC the following materials on or shortly after the Effective Date:
1. Source code for the Unix port version of the Original SimCity.
2. Any EA Documentation that EA deems necessary.
General Software Requirements: OLPC agrees that the OLPC SimCity will not be approved by EA for distribution under Section 2.2 of this Agreement, until the OLPC SimCity meets the following general software requirements:
1. EA’s QA team is unable to crash the game in sixteen (16) man-hours of play-time.
2. EA’s QA team is unable to find images/language that is deemed inappropriate to achieve an “E” rating by the ESRB standard.
3. No use of any EA Trademarks that would reflect negatively upon the established reputation of EA.
4. Add copyright/license information to each source file to reflect the proper licensing.
Specific Software Requirements: OLPC agrees that the OLPC SimCity will not be approved by EA for distribution under Section 2.2 of this Agreement, until the OLPC SimCity meets the following specific software requirements
1. The Air Crash Disaster is removed from the game.
2. EA approved splash screen is shown before the start of the game.
3. Simplify the Main Menu with EA provided GUI elements.
4. All text in the game must be legible.
5. Game audio must work.
6. Remove all attempted multi-player features.
7. SimCity Should be properly integrated to the XO’s GUI
8. Code for the EA approved splash screen is not included in the source code to be distributed with the OLPC SimCity executable.
If he is not the same author, then you are right. One statement from an other poster suggested, that he is.
The original author would have the right to add new alternative license conditions as he wishes to.
Maybe the author of 3D City should say something about it.
Edit:
Now I saw, what you mean. MicropolisJS seems to be an alteration of the GPL'ed Micropolis of an other author. And the owner of MicropolisJS stripped the GPL license from it to use it in the other project (btw. why?). I am no lawyer, but it really looks to me as a violation of the GPL, at least without permission of the first author.
It's not a clone, it's derived from the original SimCity source code, which EA licensed under GPL V3 with the added condition that it should not be called "SimCity" without EA's approval. So it's important that all versions of the code include that license and the required provisions.
2.1 Modification. EA hereby grants to OLPC a non-exclusive, non-transferable, non-sub licensable, non-assignable, revocable right and license to modify the Original SimCity as provided by EA for the sole purpose of producing a version of the Original SimCity for distribution on laptops provided through the OLPC Program pursuant to the specifications set forth in Exhibit A ("OLPC SimCity"). All right, title and interest in OLPC SimCity and any interim modifications shall belong solely to EA. OLPC SimCity, and any subsequent versions, will not be distributed by OLPC unless the software meets the requirements set forth in Exhibit A. For the avoidance of doubt, nothing contained in this Agreement shall be deemed to limit or restrict EA’s right to use, modify, sell, distribute or license the Original SimCity in any other manner as EA so desires.
And on a completely unrelated topic:
Q: How do you know there's an elephant hiding under your bed?
In addition, micropolisJS has additional terms added to the GPL [0], which are clearly linked to from the top of every source file in micropolisJS [1], which need to be distributed with 3D City.
[0] http://micropolisjs.graememcc.co.uk/LICENSE
[1] https://github.com/graememcc/micropolisJS/blob/master/js/Blo...