For Apache:
SSLProtocol all -SSLv2 -SSLv3
For Nginx:
ssl_protocols TLSv1 TLSv1.1 TLSv1.2;
Source: http://blog.rlove.org/2013/12/strong-ssl-crypto.html
Nartac IIS Crypto gives a nice GUI to manage all Protocols, Ciphers, Hashes and Key Exchanges https://www.nartac.com/Products/IISCrypto/