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by seanhunter 241 days ago
For people who are unfamiliar, k-means is a partitioning algorithm that aims to group observations into a specific number (k) of clusters in such a way that each observation ends up in the cluster with the “nearest” mean. So say you want 5 groups, it will make five groups so that every observation is in the group where it’s nearest to the mean.

And so that raises the question of what “nearest” means, and here this allows you to replace Euclidian distance with things like Kullback-Leibler divergence (that’s the KL below) which make more sense than Euclidian distance if you’re trying to measure how close two probability distributions are to each other.

1 comments

> And so that raises the question of what “nearest” means

To me, the definition of "nearest" is just a technicality.

The real question is: what is K?

The total number of clusters. Determining this algorithmically is a fun open problem https://en.wikipedia.org/wiki/Determining_the_number_of_clus....

For the data I work with at $dayjob I've found the Silhouette algorithm to perform best but I assume it will be extremely field specific. Clustering your data and taking a representative sample of each cluster is such a powerful trick to make big data small but finding an appropriate K is an art more than a science.

At a previous $dayjob at a very large financial institution, it's however many clusters are present in the strategy that was agreed to by the exec team and their highly paid consultants.

You find that many clusters and shoehorn the consultant provided categories on to the k clusters you obtain.

To be fair finding K is highly domain dependent and I would argue should not be for the analyst (solely) to decide, but with a feedback from domain experts.
K is whatever you want it to be. You want 5 clusters k=5. If you don’t know the right number of clusters try a few different values of k and see which partitions your sample in a way that’s good for your problem
Have you tried HDBSCAN (DBSCAN variant) or Hierarchical Clustering (HAC) ?
Me? I probably tried every classification algorithm and their H variants. I still think "What is K?" is a profound question.
I agree it is a profound question. My thesis is fairly boring.

For any given clustering task of interest, there is no single value of K.

Clustering & unsupervised machine learning is as much about creating meaning and structure as it is about discovering or revealing it.

Take the case of biological taxonomy, what K will best segment the animal kingdom?

There is no true value of K. If your answer is for a child, maybe it’ 7 corresponding to what we’re taught in school - mammals, birds, reptiles, amphibians, fish, and invertebrates.

If your answer is for a zoologist, obviously this won’t do.

Every clustering task of interest is like this. And I say of interest because clustering things like digits in the classic MNIST dataset is better posed as a classification problem - the categories are defined analytically.