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by siver_john 368 days ago
Amazing article on Molecular dynamics, in the infinite number of things they could add is a small segment on coarse graining. Though I'm biased (and have been thinking about writing one myself).

Granted wished this had been around when I started my journey instead of having to delve into things like the Amber manual... (which I will grant is wonderful for its information but the organization isn't as convenient).
1 comments
abhishaike 368 days ago
Author here, I wish I added a section on coarse graining as well :) hope you write a post about it!
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fentonc 368 days ago
Fun article! I was one of the architects on Anton 2 and Anton 3 at DESRES.
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max_ 368 days ago
Hi,

Do you have any resources that you recommend on coarse graining?

I am really interested in the topic.

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siver_john 367 days ago
Depends on how deep you want to go. The pioneering work in this field is the "The multiscale coarse-graining method." series of papers kicked off by Noid. Who is still a person to pay attention to in this field.

I also believe the work of Frank Noe is someone to watch for in the ML potential space for proteins.

I'm also always happy to talk about CG.

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max_ 367 days ago
How do I get in touch?

My email OTOH is in my bio.

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siver_john 367 days ago
Sent an email =)
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frgoe 368 days ago
I am currently working on CG potentials. Can really recommend the basics from Gregory A. Voth.
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