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by FL33TW00D 387 days ago
399 from YSeq seems fine for 30x coverage.

Gemini says a reasonable cost estimate from saliva to SNPs is $163.84 - $211.84 using Ultima $80 for sequencing (funny that sequencing is no longer the bottleneck on cost).

FASTQ is fine but I'd prefer BINSEQ: https://github.com/ArcInstitute/binseq. I'm writing my own pipeline from BINSEQ.