Well, then I recommend that you invest a few more years in university level studies to understand the subject matter, and then again try to provide an efficient solution to the protein folding problem using MD. Good luck.
Try to understand the maths, apply the circle / sphere transform and you’ll see that naturally it converges to a stable state. MD is the hard way, spherical transform is the easy way (nature uses it)
My theory on maths shows that any shape can have its points on a circle edge and midpoints on that same circle edge morphing showing all possible paths through radius scaling (P=C). It’s all about constraints.
Transforming the protein through 3D coordinates aligns all forces so it is fundamentally different than MD, it’s a geometric solver, so it is super fast!
My theory on maths shows that any shape can have its points on a circle edge and midpoints on that same circle edge morphing showing all possible paths through radius scaling (P=C). It’s all about constraints.
Transforming the protein through 3D coordinates aligns all forces so it is fundamentally different than MD, it’s a geometric solver, so it is super fast!