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They do, but not the depths we're talking about (12,500 feet) https://navalpost.com/how-deep-can-a-submarine-dive/
The depth limits of the most known nuclear powered submarines’ depth limits, as follows; Typhoon-class: Test depth 900 m (3,000 ft)
Astute-class: Over 300 m (984 ft 3 in)
Akula-class: 480 m (1,570 ft) test depth for Akula I and Akula I Improved, 520 m (1,710 ft) for Akula II and III, 600 m (2,000 ft) maximum operating depth
Ohio-class: Test depth >240 m (800+ ft)
Virginia-class: Test depth >240 m (800+ ft)
Borei-class: Test depth 950 m
Rubis-class: Test depth 350 m
Barracuda-class: Test depth >350 m |
We really don’t know what depth the noise was comming from.
That being said it is vanishingly unlikely that an unrelated submarine trying to remain stealthy would be banging on their hull every half an hour.