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by syastrov 1214 days ago
It is super interesting! I was at a talk where a genetics company used the Smith-Waterman algorithm (1) to perform sequence alignment. Still I believe it took a long time (24 hours?) to perform the calculations. They were working on optimizing the code as doing so could mean a faster turnaround.

1. https://en.m.wikipedia.org/wiki/Smith–Waterman_algorithm