[ahns]

For microscopy images, have you tried ashlar?

https://github.com/labsyspharm/ashlar

It may help to have the microscope stage positions available in the OME metadata.

[kwon-young]

I did not know of this project. I suppose it did not come up in my research sinve I was looking for simple Guis that my dad could use.

His setup only has a simple microscope camera that can stream a video to an old windows xp pc with a hardware/software combination...