[pidtuner]

That is true, that is why there is a slider in the tool that allows you to trade-off performance for robustness. The bode plot is also an indication on how the closed loop performs in frequency domain, so you would normally choose different tunings according to specific use cases (e.g. some frequency response for tracking and a different one for just regulating)

[SavantIdiot]

You know, after I posted I noticed there was a "next" button and started using it (I thought it was GitHub only). You pretty much captured a lot of the tradeoffs. Very nicely, might I add: the UI/UX funneling is clever! I'm off to cram a step function into my flight controller... :)