[mcshaner1]

I think these are reasonably good, but I can't say I've read every paper on either list. They are reading lists for qualifying exams rather than a course, but I think they'll still be useful.

Wisconsin Arch: http://pages.cs.wisc.edu/~karu/qualwiki/

UIUC Arch: http://rsim.cs.illinois.edu/arch/arch_qual.html