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by rfc 2765 days ago
Yeah... it unfortunately doesn't work like that. Illumina is notorious for glossing over many of the finer points around how they get to the fictitious numbers they claim. What they don't point out are all of the reagents, prep kits, overhead, lab costs, labor costs, software costs, pipettes, etc.

The only way this company stays alive without significant venture funding (which it appears they don't have) is through partnering with pharmas. From reading their privacy policy, it looks like they are de-identifying genotypic and phenotypic data from users. This, at scale, creates a nice population based genetics study so that if I'm a pharma, I can look at a specific biomarker and all data associated with it. That helps me build drugs against certain genes, diseases, etc.

So yes, you are the still the product and yes, your data is being resold.

3 comments

If data is anonymized properly, aren't we just enabling the creation of better, more effective medicine?
Define "properly".

At one point, we thought that simply replacing a user's IP with a unique ID was enough to anonymise.

At one point, a blur or pixelating filter on a photo was sufficient to anonymise it.

At one point, Monero transactions were considered anonymous.

There is nothing that identifies a person more precisely than their genome. It is, after all, unique to each person.

That means that by definition, anonymizing genomes is impossible. If someone tells you they will 'anonymize' your genome data, run away, they don't know what they are doing.

You can't anonymize your DNA.
Illumina’s margins on consumables are very high:

http://41j.com/blog/2018/11/illumina-consumables-are-90-prof...

Their overall gross margin is >60%. I suspect that instrument margins are actually also quite high, but they factor in R&D spending on instrument costs.

However, Dante labs appear to be using BGI, not Illumina for sequencing.

They’re using BGI machines, not Illumina
They don't have their own labs based on how they phrased it within their About Us section. Given that + the turnaround time I'm seeing on the web, I'm willing to bet they outsource this to universities who have sequencer downtown.

Also, in their About Us section they have every technology listed under the sun (Illumina, PacBio, Thermo, BGI) so I think it's just whatever they can get their hands on based on which labs have open runs. Seems quite questionable from a data integrity perspective if you're trying to do population based genetics. The quality between sequencers varies dramatically.

Given the error rates shown for this product it seems unlikely this is anything but BGI sequencing.

The BGI (MGI) have been pushing out new instruments, reportedly with lower error rates (and much cheaper than Illumina).

They’ve also been building out service centers outside China, and I suspect this is where the sequencing being done by this service is located.

Universities do sometimes offer sequencing as a service, but I suspect not at as low a price point as the BGI, even for those universities with attached genome centers.

Good catch on the error rates. Didn't see that.

We go up against universities all the time in our competitive deals. They're generally always cheaper since everything is subsidized however the turnaround times are usually significant and the quality is not entirely repeatable. The cost here looks heavily subsidized just as a way to spark interest.