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>collected a large amount of ebooks, papers, articles, movies, pictures, etc. (all digital). Since you mentioned those specific examples, I see a commonality and so I'm going to assume you're primarily concerned about organizing files that are not authored/generated by you. (Except possibly pictures/photos since you might be talking about jpgs from your personal iPhone or digital camera.) This distinction is key because software like Org-Mode, Evernote, MS OneNote, etc is better for personally generated note taking -- like classroom lecture notes, or brainstorming, or personal todo lists. Those tools are not suitable for saving and managing a terabyte of movie files. However, they have one exception to the "being bad at managing collections of the world's data that I didn't write" -- they do have very good "web clipping" functionality. Instead of saving url bookmarks that might suffer digital rot, you can use the web clip tool. (Personally, I prefer to save important webpages as .mhtml archives. This doesn't work for javascript heavy sites but for the type of informative webpages I want to save for later reference, this usually isn't an issue.) Likewise, the software that's good at cataloging a "library" of collected files with capabilities for custom tagging (e.g. Adobe Lightroom for photos, iTunes for music, Zotero for pdfs, etc) are the wrong tools for archiving personal notes. For a disparate collection of digital files, the best method I've found is to leverage the native filesystem in Linux/Mac/Windows. Create a hierarchy of well-named folders to build a sensible taxonomy and put all your pdf, epub, mp4, jpg, mp3 in meaningful locations. There is no good universal organizing software for organizing all the file formats that has the longevity and transparency of the native file system. |
Let me warn you: I tried to use OneNote this way. The web clipper is really nice and I used it heavily to clip everything interesting on the web from my desktop and my phone until my OneNote file reached 8GB. Syncing just completely gave up and there is no way to export everything in a usable format.
Since then I use a separate Firefox 52.5.0 instance with the old ScrapBook plugin. I can send sites to it from a current Firefox instance and from mobile. It works ok and, in case this setup should stop working at some point in the future, I still have all sites sitting on my local drive.
Unfortunately the browser makers don't give a damn about saving and organizing Websites locally, although I'd believe that this would be far superior to Bookmarks. I love scraping my local library for useful stuff and I've been bitten by link rot far too often.
For personal notes and todo lists I prefer simple text files with a few categories. Lately I'm also giving Boostnote [1] a try, which simply looks a bit better and allows me to add checkboxes and proper headings/separators.
[1] https://boostnote.io/