To frame in a comment we often hear around here: if you don't control your funding, you don't control your destiny.
Building anything for the US government that's big enough and has potential military applications is virtually inviting them (and the large project procurement morass they bring) to become involved.
The Soviet Buran shuttle had the right idea. It didn't have main engines and was launched with the Energia rocket, which could be used independently with other cargo as well. Also, it was capable of fully automated landing, unlike the American Shuttle