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by sushid 3362 days ago
Have you already done a 23andMe analysis? If so, you can check out https://promethease.com/. It's exactly what you're looking for as they have constant updates that make it worth your while to rescan every year or so.
5 comments

Promethease is awesome. I uploaded my 23andMe data to it and got back the kind of data I'd been hoping for in the first place.

Fair warning: the UI is very geeky. I think any HN reader should be able to find their way around without trouble, but I wouldn't recommend it to my non-technical friends or family.

Are you saying 23&Me gives you a file with the full list of chromosome's ACGT data? I've always wanted that.

Also is prometheus and open source analyzer?

23&Me will let you download a text file with the ACGT data, but only for the SNPs that it has. 23&Me does not sequence your full genome, so the SNPs available are a small subset of your DNA.

Prometheus is not open-source (I think), but all it does is read various files with DNA data (like the 23&me export), and match it up with the information in SNPedia (a Wikipedia-like open repository of what we know about certain SNPs), and then exports it to a pretty HTML/JS web report for you that you can download and save.

Is it possible to do client side? I'd rather download the db and match it locally than ship my genome to them.
Yes. The author pushes people to the web version since it's more up to date, easier to maintain, etc., but there's a local version, see:

http://snpedia.com/index.php/Promethease/Desktop http://snpedia.com/index.php/Promethease/privacy

Why would you need to be rescanned? Does your DNA change that often?
Not your DNA, but your Promethease analysis can be redone every year or so as they're constantly adding new analyses.
Makes sense, thanks!
They mean rescan with the Promethease software. Our knowledge around genetic variation is evolving rapidly.
IIRC but this is what 23andMe used to do before their FDA smackdown.
Thanks! This is way more interesting than the data 23andMe provides.