|
|
|
|
|
by aBioGuy
3814 days ago
|
|
Agreed. I'm more interested in the cheap semi-quick data storage ($0.01 / GB / month) than any of the workflows they offer. I'm also not interested in learning a new syntax to replace what I can do with UNIX / python / R (ggplot2) already. |
|
Here are two examples from the iobio project.
A heads-up display describing a BAM (alignment) file streaming between two remote servers:
http://bam.iobio.io/?bam=http://s3.amazonaws.com/iobio/NA128...
Streams another BAM from the 1000 Genomes project through two variant callers, with dynamically-updated statistics about the results. You can modify the variant quality threshold for each caller and the results are recomputed in real time:
http://iobio.io/demo/variantcomparer/
Edit:
Very nice visualization of interesting statistics from a VCF file, provided by URL or uploaded:
http://vcf.iobio.io/?vcf=http://s3.amazonaws.com/vcf.files/A...